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刘辉
2013-12-16      已浏览  956  次

 

姓名 刘辉 性别

出生年月 1980.9 政治面貌 群众
职称 副教授 学位 博士
职务 教师
E-mail hliu@cczu.edu.cn
研究方向 数据挖掘,生物医药数据分析
一、教育经历

 

2006/092010/01,复旦大学,计算软件与理论,博士

2002/092004/07,南京大学,计算软件与理论,硕士

1998/092002/07,东北石油大学,应用数学,本科,

二、工作经历

 

2014/06现在,新加坡南洋理工大学, 博士后

2010/02现在,常州大学,副教授,

2004/092006/06,中兴通讯(南京研发中心),高级软件工程师

三、承担的主要研究项目

 

1. 核小体定位在基因表达调控中的功能预测,负责人,国家自然科学基金(No.311009542012.12014.12)

2. 基于生物信息计算的核小体定位预测方法研究,负责人,上海市智能信息处理重点实验室开放课题(No.iipl-2010-011,20102012)

3. 教学资源数字化建设和共享机制研究,负责人,常州科教城(高职教育园区)院校科研基金项目(No.K20102042011.12012.12)

4. 重要热带作物木薯品种改良的基础研究,参与人,国家重点基础研究发展计划项(973计划,No.2010CB1266002010.12014.12)

5. 数据空间关键技术研究,参与人,国家自然科学基金(No.60873070;2009.12011.12)

6. XML数据组织与检索在地理信息中的应用, 参与人,863课题(No.2009AA01Z135;2009.102010.12)

四、代表性论文与专著

 

1. Hui Liu, Ting Jin, Jihong, Shuigeng Zhou. Histone modifications involved in cassette exon inclusions: a quantitative and interpretable analysis, BMC Genomics. 15:1148, 2014.

2. Zhuang Z, Lv T, Li M, Zhang Y, Xue T, Yang L, Liu Hui, Zhang W. The Lifespan-Extending Effects of Nymphaea hybrid Root Extract in the Nematode Caenorhabditis elegans. Plant Foods Hum Nutr. 2014, 69(4):304-9.

3. W Wang, B Feng, J Xiao, Z Xia, X Zhou, P Li, W Zhang, Y Wang, B L Moller, P Zhang, M Luo, G Xiao, J Liu, J Yang, S Chen, PD Rabinowicz, X Chen, H Zhang, H Ceballos, Q Lou, M Zou, L Carvalho, C Zeng, J Xia, S Sun, Y Fu, H Wang, C Lu, M Ruan, S Zhou, Z Wu, Hui Liu, RM Kannangara, K Jorgensen, RL Neale, M Bonde, N Heinz, W Zhu, S Wang, Y Zhang, K Pan, M Wen, P Ma, Z Li, M Hu, W Liao, W Hu, S Zhang, J Pei, A Guo, J Guo, J Zhang, Z Zhang, J Ye, W Ou, Y Ma, X Liu, LJ Tallon, K Galens, S Ott, JHuang, J Xue, F An, Q Yao, X Lu, M Fregene, L López-Lavalle, J Wu, FM You, MChen, S Hu, G Wu, S Zhong, P Ling, Y Chen, Q Wang, G Liu, B Liu, K Li, M Peng. Cassava genome from a wild ancestor to cultivated varieties. Nature Communications, 5:5110, 2014

4. T Jin, Hui Liu, D Li, Jing Chen. Context-aware Movie Recommendations with Factorization Machines. Journal of Computational Information Systems, 10:8 3313–3323, 2014.

5. Hui Liu, Shuigene Zhou, Jihong Guan. Identifying mammalian microRNA targets based on supervised distance metric learning. IEEE Journal of Biomedical and Health Informatics, 2013, 17(2) :427-435.

6. Wei Xiong, Luyu Xie, Shuigeng Zhou, Hui Liu, Jihong Guan. The centrality of cancer proteins in human protein-protein interaction network: a revisit. International Journal of Computational Biology and Drug Design, 2014, 7(2-3):146-56

7. Zhang W, Lv T, Li M, Wu Q, Yang L, Liu H, Sun D, Sun L, Zhuang Z, Wang D. Beneficial Effects of Wheat Gluten Hydrolysate to Extend Lifespan and Induce Stress Resistance in Nematode Caenorhabditis elegans. PLoS One. 2013, 8(9):e74553.

8. Liu Hui, Zhang R, Xiong W, Guan J, Zhuang Z, Zhou S. A comparative evaluation on prediction methods of nucleosome positioning. Brief Bioinform, 15 (6): 1014-1027, 2014.

9. Wei Xiong, Hui Liu, Jihong Guan, Shuigeng Zhou. Protein function prediction by collective classification with explicit and implicit edges in protein-protein interaction networks. BMC Bioinformatics, 2013, 14(Suppl 12):S4.

10. Hui Liu, Ting Jin, Ruiqi Liao, Linxia Wan, Bin Xu, Shuigeng Zhou, Jihong Guan. miRFANs: an integrated database for Arabidopsis thaliana microRNA function annotations. BMC plant biology, 2012, 12:68.

11. Hui Liu, ZiHeng Zhuang, JiHong, Guan, ShuiGeng, Zhou. Transcriptional Regulation Functions of Nucleosome Positioning: a Survey. Progress in Biochemistry and Biophysics, 2012, 39(9): 843~852.

12. Wei Xiong, Hui Liu, Jihong Guan, Shuigeng Zhou. Effectively predicting protein functions by collective classification — An extended abstract. IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012, 634-639.

13. Hui Liu. Quantifying transcriptional regulatory networks by integrating sequence features and microarray data. Bioprocess and Biosystem Engineering, 2010, 33(4):495-505.

14. Hui Liu, Shuigeng Zhou, Jihong Guan. Detecting microarray data supported microRNA-mRNA interactions. International Journal of Data Mining and Bioinformatics, 2010, 4(6):639-655.

15. Da Jiang, Shuigeng Zhou, Hui Liu, Yi-Ping Phoebe Chen. Inferring Minimal Feasible Metabolic Networks of Escherichia coli. Applied Biochemistry and Biotechnology, 2009, 2273-2289.

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